This page shows detailed deep learning-derived predictions and motifs for CTCF in astrocyte using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000202.1 |
| Cell line/tissue: | astrocyte |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AOO |
| Model: | BPNet |
| A [ | -1.46e-03 | -3.45e-03 | -2.88e-03 | -6.47e-04 | -4.30e-04 | 3.28e-03 | -5.02e-04 | -2.73e-04 | -2.31e-03 | 1.95e-02 | -2.21e-03 | -5.50e-03 | -5.46e-04 | -3.07e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.21e-02 | 6.09e-02 | -7.13e-04 | 1.16e-01 | 1.74e-01 | 5.73e-02 | 7.72e-02 | 1.90e-01 | 9.72e-04 | -2.16e-03 | 1.30e-02 | 6.81e-03 | -3.17e-04 | -1.52e-03 | ] |
| G [ | 3.40e-02 | -3.69e-04 | 9.41e-02 | 4.86e-05 | -4.55e-05 | -3.15e-04 | -2.16e-04 | -8.39e-05 | -3.01e-04 | 1.85e-02 | 6.43e-02 | -1.49e-04 | 1.94e-01 | 1.02e-01 | ] |
| T [ | -3.15e-03 | 6.11e-03 | -3.32e-03 | -1.49e-03 | -8.01e-04 | -4.38e-03 | 1.34e-02 | -4.19e-04 | 8.15e-02 | -5.19e-03 | -1.83e-03 | 2.77e-02 | -8.54e-04 | -2.15e-03 | ] |
| A [ | 2695 | 1632 | 1713 | 2241 | 159 | 11173 | 155 | 5 | 1363 | 10478 | 962 | 3936 | 3 | 2003 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9761 | 11371 | 587 | 25496 | 28090 | 15269 | 16637 | 28507 | 1553 | 1905 | 11246 | 2639 | 0 | 1579 | ] |
| G [ | 13050 | 1385 | 22996 | 418 | 32 | 607 | 83 | 1 | 418 | 11773 | 14632 | 840 | 28526 | 22056 | ] |
| T [ | 3033 | 14151 | 3242 | 383 | 257 | 1488 | 11663 | 25 | 25205 | 4382 | 1698 | 21123 | 9 | 2900 | ] |
