This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus muscularis mucosa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000207.1 |
| Cell line/tissue: | esophagus muscularis mucosa |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR074SFL |
| Model: | BPNet |
| A [ | -1.04e-03 | -2.14e-03 | -2.28e-03 | -7.54e-04 | -4.45e-04 | 3.66e-03 | -3.57e-04 | -2.24e-04 | -1.63e-03 | 1.57e-02 | -1.23e-03 | -3.91e-03 | -3.42e-04 | -2.13e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.11e-02 | 4.32e-02 | -2.71e-06 | 8.83e-02 | 1.37e-01 | 4.07e-02 | 5.90e-02 | 1.49e-01 | 7.84e-04 | -1.75e-03 | 9.19e-03 | 6.82e-03 | -1.28e-04 | -1.17e-03 | ] |
| G [ | 2.15e-02 | -1.88e-04 | 7.12e-02 | 2.16e-04 | -3.78e-05 | 7.73e-05 | 1.41e-05 | -1.63e-05 | -1.57e-04 | 1.61e-02 | 5.83e-02 | -4.53e-04 | 1.54e-01 | 8.33e-02 | ] |
| T [ | -2.28e-03 | 6.68e-03 | -2.33e-03 | -1.03e-03 | -5.96e-04 | -2.46e-03 | 1.59e-02 | -3.05e-04 | 6.62e-02 | -5.26e-03 | -1.41e-03 | 2.40e-02 | -5.07e-04 | -1.85e-03 | ] |
| A [ | 3127 | 1861 | 2729 | 2603 | 514 | 9980 | 376 | 135 | 1736 | 10621 | 809 | 3927 | 126 | 1632 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9812 | 15531 | 1837 | 25348 | 29714 | 17332 | 19731 | 30844 | 2637 | 2707 | 10147 | 5844 | 137 | 1779 | ] |
| G [ | 14856 | 2435 | 22187 | 2000 | 495 | 1948 | 420 | 67 | 1239 | 13394 | 18797 | 1479 | 30547 | 25421 | ] |
| T [ | 3500 | 11467 | 4542 | 1345 | 572 | 2035 | 10767 | 249 | 25682 | 4573 | 1542 | 20045 | 485 | 2463 | ] |