This page shows detailed deep learning-derived predictions and motifs for CTCF in pancreas using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000209.1 |
| Cell line/tissue: | pancreas |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DND |
| Model: | BPNet |
| A [ | -1.76e-03 | -4.35e-03 | -4.33e-03 | -9.89e-04 | -7.13e-04 | 9.25e-03 | -6.97e-04 | -3.84e-04 | -2.60e-03 | 2.62e-02 | -2.42e-03 | -6.57e-03 | -8.51e-04 | -3.66e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.84e-02 | 7.91e-02 | -7.78e-04 | 1.59e-01 | 2.42e-01 | 6.93e-02 | 9.89e-02 | 2.49e-01 | 4.41e-04 | -2.89e-03 | 1.60e-02 | 9.05e-03 | -4.92e-04 | -2.18e-03 | ] |
| G [ | 4.55e-02 | -7.90e-04 | 1.31e-01 | -5.11e-05 | -1.01e-04 | -3.54e-04 | -1.41e-04 | -1.13e-04 | -4.62e-04 | 1.99e-02 | 7.98e-02 | -6.73e-04 | 2.35e-01 | 1.17e-01 | ] |
| T [ | -4.24e-03 | 1.39e-02 | -4.81e-03 | -1.75e-03 | -1.19e-03 | -4.77e-03 | 2.68e-02 | -5.36e-04 | 1.03e-01 | -6.06e-03 | -2.21e-03 | 3.90e-02 | -1.08e-03 | -2.36e-03 | ] |
| A [ | 3182 | 1614 | 2978 | 2735 | 330 | 13250 | 278 | 97 | 2089 | 12864 | 1103 | 4748 | 287 | 2487 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11392 | 18637 | 968 | 31954 | 35589 | 19349 | 21788 | 36226 | 2706 | 3296 | 12875 | 6130 | 306 | 2612 | ] |
| G [ | 18594 | 1485 | 27747 | 1015 | 107 | 1627 | 263 | 44 | 1162 | 14843 | 20400 | 1602 | 35022 | 27835 | ] |
| T [ | 3354 | 14785 | 4828 | 817 | 495 | 2294 | 14192 | 154 | 30564 | 5518 | 2143 | 24040 | 906 | 3586 | ] |
