This page shows detailed deep learning-derived predictions and motifs for SRF in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | SRF |
| Model ID: | BP000211.1 |
| Cell line/tissue: | GM12878 |
| Class: | MADS box factors |
| Family: | Responders to external signals (SRF/RLM1) |
| Best Match(es): | MA0083.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P11831 |
| Source: | ENCSR000BMI |
| Model: | BPNet |
| A [ | -3.65e-04 | -1.81e-05 | 1.83e-02 | 9.51e-03 | 4.80e-02 | 4.09e-03 | 3.56e-02 | 8.67e-03 | 4.70e-04 | -9.25e-05 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.21e-02 | 7.43e-02 | -4.30e-04 | -7.21e-04 | -1.08e-04 | -1.04e-03 | -1.63e-04 | -4.63e-06 | 5.47e-06 | -6.87e-05 | ] |
| G [ | -9.93e-05 | 6.23e-06 | 2.25e-05 | -5.02e-04 | -3.91e-04 | -6.98e-04 | -2.91e-04 | -1.02e-03 | 8.25e-02 | 7.68e-02 | ] |
| T [ | -5.96e-04 | 1.46e-03 | 2.14e-03 | 1.65e-02 | 9.93e-05 | 2.93e-02 | 7.97e-04 | 7.28e-03 | 3.44e-06 | -3.05e-04 | ] |
