Detailed information of deep learning profile BP000215.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000215.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR952GOL
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.54e-03 -3.18e-05 6.66e-03 5.39e-02 8.40e-06 2.84e-02 -3.88e-04 1.69e-03 1.39e-03 -2.62e-03 1.16e-04 -5.68e-04 1.51e-03 -4.36e-04 -1.69e-03 ]
C [ -7.50e-05 -1.58e-05 -9.76e-04 -1.12e-05 7.89e-02 -1.56e-04 6.72e-04 -6.22e-04 2.80e-03 2.10e-03 -7.47e-05 -3.83e-04 -1.53e-03 3.76e-02 5.09e-03 ]
G [ 5.41e-03 5.70e-02 -1.07e-03 9.68e-06 -3.02e-06 1.23e-03 1.30e-04 -7.70e-04 7.28e-04 -1.21e-03 6.99e-02 -4.43e-04 -1.11e-03 -3.15e-04 -6.55e-06 ]
T [ -9.98e-04 -4.16e-05 2.19e-03 -3.77e-05 7.10e-05 -4.35e-04 5.28e-03 3.19e-03 -4.41e-04 1.70e-02 -9.51e-06 4.14e-02 3.23e-03 -1.17e-03 5.29e-03 ]

Frequency matrix

A [ 5728 480 5269 11466 5 9616 2244 3791 3138 2843 42 1695 3141 2085 2284 ]
C [ 205 45 1592 67 12141 276 2987 2405 3766 787 12 871 2614 7304 4000 ]
G [ 3996 11299 2404 160 3 611 3156 2282 2938 815 12115 822 2111 543 839 ]
T [ 2243 348 2907 479 23 1669 3786 3693 2330 7727 3 8784 4306 2241 5049 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages