Detailed information of deep learning profile BP000215.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000215.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR952GOL
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.29e-03 -1.17e-03 3.23e-03 4.14e-02 -9.51e-06 1.70e-02 -4.41e-04 3.19e-03 5.28e-03 -4.35e-04 7.10e-05 -3.77e-05 2.19e-03 -4.16e-05 -9.98e-04 ]
C [ -6.55e-06 -3.15e-04 -1.11e-03 -4.43e-04 6.99e-02 -1.21e-03 7.28e-04 -7.70e-04 1.30e-04 1.23e-03 -3.02e-06 9.68e-06 -1.07e-03 5.70e-02 5.41e-03 ]
G [ 5.09e-03 3.76e-02 -1.53e-03 -3.83e-04 -7.47e-05 2.10e-03 2.80e-03 -6.22e-04 6.72e-04 -1.56e-04 7.89e-02 -1.12e-05 -9.76e-04 -1.58e-05 -7.50e-05 ]
T [ -1.69e-03 -4.36e-04 1.51e-03 -5.68e-04 1.16e-04 -2.62e-03 1.39e-03 1.69e-03 -3.88e-04 2.84e-02 8.40e-06 5.39e-02 6.66e-03 -3.18e-05 7.54e-03 ]

Frequency matrix

A [ 5049 2241 4306 8784 3 7727 2330 3693 3786 1669 23 479 2907 348 2243 ]
C [ 839 543 2111 822 12115 815 2938 2282 3156 611 3 160 2404 11299 3996 ]
G [ 4000 7304 2614 871 12 787 3766 2405 2987 276 12141 67 1592 45 205 ]
T [ 2284 2085 3141 1695 42 2843 3138 3791 2244 9616 5 11466 5269 480 5728 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages