This page shows detailed deep learning-derived predictions and motifs for CTCF in gastroesophageal sphincter using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000217.1 |
| Cell line/tissue: | gastroesophageal sphincter |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR298ZPF |
| Model: | BPNet |
| A [ | -1.73e-03 | -3.77e-03 | -4.06e-03 | -4.57e-04 | -6.23e-04 | 6.61e-03 | -6.15e-04 | -3.79e-04 | -3.20e-03 | 1.99e-02 | -2.28e-03 | -7.12e-03 | -7.57e-04 | -3.84e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.59e-02 | 6.86e-02 | -1.00e-03 | 1.36e-01 | 2.04e-01 | 6.34e-02 | 8.77e-02 | 2.18e-01 | 1.18e-03 | -2.10e-03 | 1.64e-02 | 9.59e-03 | -3.75e-04 | -2.07e-03 | ] |
| G [ | 3.79e-02 | -9.56e-04 | 1.08e-01 | -1.19e-04 | -3.89e-05 | 2.36e-04 | -7.06e-05 | -5.48e-05 | -4.66e-05 | 2.19e-02 | 7.30e-02 | -7.53e-04 | 2.04e-01 | 1.05e-01 | ] |
| T [ | -3.69e-03 | 8.83e-03 | -3.03e-03 | -1.75e-03 | -8.68e-04 | -4.65e-03 | 2.18e-02 | -4.36e-04 | 8.41e-02 | -6.87e-03 | -2.65e-03 | 2.89e-02 | -9.25e-04 | -1.60e-03 | ] |
| A [ | 4039 | 2040 | 3271 | 3171 | 102 | 13920 | 446 | 112 | 2416 | 14057 | 1270 | 5843 | 7 | 2728 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13245 | 21016 | 1237 | 35528 | 40726 | 22436 | 24134 | 40753 | 3331 | 4057 | 14542 | 6606 | 19 | 2934 | ] |
| G [ | 19692 | 2009 | 30445 | 1482 | 47 | 2045 | 530 | 43 | 1656 | 16548 | 22957 | 1849 | 41011 | 31507 | ] |
| T [ | 4147 | 16058 | 6170 | 941 | 248 | 2722 | 16013 | 215 | 33720 | 6461 | 2354 | 26826 | 86 | 3953 | ] |
