Detailed information of deep learning profile BP000219.1

This page shows detailed deep learning-derived predictions and motifs for NFIB in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFIB
Model ID: BP000219.1
Cell line/tissue: HepG2
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Best Match(es): MA1643.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O00712  
Source: ENCSR414WBQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.50e-05 -4.58e-06 -3.25e-06 -1.34e-05 -2.31e-05 -6.63e-05 -3.92e-05 -5.99e-05 -1.50e-04 -2.06e-06 0.00e+00 -3.65e-06 1.59e-03 ]
C [ 8.79e-06 2.35e-06 3.02e-06 3.02e-03 2.95e-05 4.05e-04 7.44e-06 1.58e-04 4.32e-06 -8.77e-07 2.72e-03 2.58e-03 -7.75e-06 ]
G [ -2.11e-05 2.63e-03 2.62e-03 0.00e+00 1.04e-04 -3.66e-05 7.85e-05 2.13e-04 9.14e-05 2.16e-03 2.93e-06 5.71e-06 2.07e-06 ]
T [ 1.52e-03 0.00e+00 -3.59e-06 0.00e+00 -1.75e-04 -9.89e-06 -3.64e-05 -6.69e-05 -2.61e-05 -9.04e-05 -2.61e-06 0.00e+00 -2.95e-06 ]

Frequency matrix

A [ 62 10 16 1 411 159 260 218 238 15 9 36 785 ]
C [ 37 2 14 1034 271 360 222 266 40 23 1003 984 105 ]
G [ 158 999 1001 0 87 260 303 405 421 905 11 7 60 ]
T [ 778 24 4 0 266 256 250 146 336 92 12 8 85 ]

2 profiles found for the same TF (NFIB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000409.1 NFIB ENCSR702BYX MCF-7 Homo sapiens
BP000888.1 NFIB ENCSR582ZOA MCF-7 Homo sapiens
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