Detailed information of deep learning profile BP000219.1

This page shows detailed deep learning-derived predictions and motifs for NFIB in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFIB
Model ID: BP000219.1
Cell line/tissue: HepG2
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Best Match(es): MA1643.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O00712  
Source: ENCSR414WBQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.95e-06 0.00e+00 -2.61e-06 -9.04e-05 -2.61e-05 -6.69e-05 -3.64e-05 -9.89e-06 -1.75e-04 0.00e+00 -3.59e-06 0.00e+00 1.52e-03 ]
C [ 2.07e-06 5.71e-06 2.93e-06 2.16e-03 9.14e-05 2.13e-04 7.85e-05 -3.66e-05 1.04e-04 0.00e+00 2.62e-03 2.63e-03 -2.11e-05 ]
G [ -7.75e-06 2.58e-03 2.72e-03 -8.77e-07 4.32e-06 1.58e-04 7.44e-06 4.05e-04 2.95e-05 3.02e-03 3.02e-06 2.35e-06 8.79e-06 ]
T [ 1.59e-03 -3.65e-06 0.00e+00 -2.06e-06 -1.50e-04 -5.99e-05 -3.92e-05 -6.63e-05 -2.31e-05 -1.34e-05 -3.25e-06 -4.58e-06 -1.50e-05 ]

Frequency matrix

A [ 85 8 12 92 336 146 250 256 266 0 4 24 778 ]
C [ 60 7 11 905 421 405 303 260 87 0 1001 999 158 ]
G [ 105 984 1003 23 40 266 222 360 271 1034 14 2 37 ]
T [ 785 36 9 15 238 218 260 159 411 1 16 10 62 ]

2 profiles found for the same TF (NFIB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000409.1 NFIB ENCSR702BYX MCF-7 Homo sapiens
BP000888.1 NFIB ENCSR582ZOA MCF-7 Homo sapiens
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