This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000222.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR130TQM |
| Model: | BPNet |
| A [ | -1.67e-03 | -8.64e-04 | 2.28e-02 | -1.48e-03 | -3.41e-03 | 6.40e-02 | -4.09e-04 | 1.91e-02 | -3.71e-03 | -5.90e-04 | -1.02e-03 | -2.79e-03 | 8.51e-03 | -2.63e-03 | -2.75e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.84e-02 | 1.39e-01 | -6.38e-04 | 4.73e-02 | 8.55e-03 | -2.30e-04 | -8.54e-05 | -1.62e-04 | -3.61e-04 | -2.56e-05 | -3.51e-04 | 8.34e-02 | -7.91e-04 | 3.18e-02 | 1.01e-02 | ] |
| G [ | -1.44e-03 | -3.56e-04 | 4.91e-03 | 9.50e-03 | -1.66e-03 | -1.34e-05 | 1.50e-01 | 5.68e-02 | 4.57e-02 | 1.38e-01 | 9.68e-02 | -9.91e-04 | 5.11e-02 | 9.73e-03 | -1.62e-03 | ] |
| T [ | -2.28e-03 | -6.32e-04 | -3.75e-03 | -1.78e-03 | 1.67e-02 | -1.97e-03 | -2.12e-04 | -4.21e-04 | 9.71e-03 | -3.71e-04 | 5.92e-05 | -2.40e-03 | -3.01e-03 | -1.13e-03 | 1.42e-02 | ] |
| A [ | 4322 | 1216 | 27465 | 2803 | 6653 | 34475 | 369 | 16532 | 2379 | 529 | 701 | 5296 | 17163 | 3738 | 5412 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 31431 | 39512 | 2171 | 22834 | 16411 | 1329 | 106 | 277 | 1560 | 115 | 827 | 32458 | 1514 | 21999 | 14715 | ] |
| G [ | 3051 | 619 | 6534 | 14807 | 3812 | 3393 | 41163 | 24711 | 22371 | 40840 | 37189 | 906 | 21277 | 12348 | 3982 | ] |
| T [ | 3023 | 479 | 5656 | 1381 | 14950 | 2630 | 188 | 306 | 15516 | 342 | 3109 | 3166 | 1872 | 3741 | 17717 | ] |
