Detailed information of deep learning profile BP000223.1

This page shows detailed deep learning-derived predictions and motifs for GATA4 in HepG2 using a single trained BPNet model.

Model details

Name: GATA4
Model ID: BP000223.1
Cell line/tissue: HepG2
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Best Match(es): MA0482.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P43694  
Source: ENCSR590CNM
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.28e-04 -8.88e-06 6.74e-07 3.62e-02 2.22e-05 1.52e-06 1.63e-03 ]
C [ 7.43e-03 4.01e-06 1.91e-05 2.34e-05 1.57e-05 2.85e-02 -3.38e-06 ]
G [ 1.44e-03 1.89e-05 2.60e-05 -3.66e-07 1.14e-05 6.57e-07 7.70e-05 ]
T [ 3.91e-04 2.81e-02 2.78e-02 -1.83e-06 2.92e-02 1.70e-07 8.32e-03 ]

Frequency matrix

A [ 1952 224 1687 17823 1587 341 5617 ]
C [ 6347 964 325 1 568 16562 1037 ]
G [ 3972 71 1236 62 289 205 1213 ]
T [ 5647 16659 14670 32 15474 810 10052 ]