Detailed information of deep learning profile BP000223.1

This page shows detailed deep learning-derived predictions and motifs for GATA4 in HepG2 using a single trained BPNet model.

Model details

Name: GATA4
Model ID: BP000223.1
Cell line/tissue: HepG2
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Best Match(es): MA0482.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P43694  
Source: ENCSR590CNM
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.32e-03 1.70e-07 2.92e-02 -1.83e-06 2.78e-02 2.81e-02 3.91e-04 ]
C [ 7.70e-05 6.57e-07 1.14e-05 -3.66e-07 2.60e-05 1.89e-05 1.44e-03 ]
G [ -3.38e-06 2.85e-02 1.57e-05 2.34e-05 1.91e-05 4.01e-06 7.43e-03 ]
T [ 1.63e-03 1.52e-06 2.22e-05 3.62e-02 6.74e-07 -8.88e-06 -1.28e-04 ]

Frequency matrix

A [ 10052 810 15474 32 14670 16659 5647 ]
C [ 1213 205 289 62 1236 71 3972 ]
G [ 1037 16562 568 1 325 964 6347 ]
T [ 5617 341 1587 17823 1687 224 1952 ]