This page shows detailed deep learning-derived predictions and motifs for CTCF in transverse colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000224.1 |
| Cell line/tissue: | transverse colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR907BES |
| Model: | BPNet |
| A [ | -1.40e-03 | -3.18e-03 | -2.78e-03 | -5.42e-04 | -3.62e-04 | 6.87e-03 | -4.72e-04 | -2.14e-04 | -2.02e-03 | 1.89e-02 | -1.87e-03 | -5.37e-03 | -4.59e-04 | -2.93e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.12e-02 | 5.64e-02 | -1.06e-03 | 1.12e-01 | 1.68e-01 | 4.97e-02 | 7.13e-02 | 1.75e-01 | 2.29e-04 | -2.27e-03 | 1.38e-02 | 5.98e-03 | -2.49e-04 | -1.61e-03 | ] |
| G [ | 3.30e-02 | -8.88e-04 | 9.31e-02 | -3.28e-04 | -2.52e-05 | -1.64e-04 | -1.25e-04 | -3.82e-05 | -2.39e-04 | 1.91e-02 | 6.08e-02 | -4.74e-04 | 1.78e-01 | 9.05e-02 | ] |
| T [ | -2.86e-03 | 1.09e-02 | -3.06e-03 | -9.96e-04 | -7.17e-04 | -3.69e-03 | 1.85e-02 | -3.71e-04 | 8.56e-02 | -5.55e-03 | -1.88e-03 | 2.89e-02 | -6.01e-04 | -1.81e-03 | ] |
| A [ | 3105 | 1584 | 2757 | 2420 | 207 | 12722 | 274 | 122 | 1744 | 12146 | 946 | 4465 | 15 | 2161 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10695 | 17121 | 849 | 30639 | 33889 | 18461 | 20198 | 34051 | 2308 | 2683 | 12189 | 4398 | 16 | 2030 | ] |
| G [ | 17284 | 1460 | 26180 | 758 | 66 | 1325 | 243 | 62 | 930 | 14461 | 19428 | 1404 | 34394 | 27088 | ] |
| T [ | 3391 | 14310 | 4689 | 658 | 313 | 1967 | 13760 | 240 | 29492 | 5185 | 1912 | 24208 | 50 | 3197 | ] |
