Detailed information of deep learning profile BP000226.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000226.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR000EHG
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.52e-03 -1.64e-03 -6.76e-06 9.06e-02 -4.22e-06 2.34e-04 -1.27e-05 -1.36e-06 4.01e-02 -1.38e-04 ]
C [ -2.02e-03 2.29e-03 1.15e-01 -1.79e-05 6.67e-02 -1.14e-04 1.37e-05 1.01e-05 -5.84e-04 3.66e-02 ]
G [ 1.61e-02 -1.83e-03 0.00e+00 1.07e-04 -3.12e-04 8.99e-02 -9.61e-06 1.11e-01 -6.08e-08 -7.12e-04 ]
T [ -1.31e-03 8.76e-03 6.87e-06 -8.04e-05 3.70e-03 -5.88e-06 9.50e-02 2.73e-06 -3.10e-04 2.08e-03 ]

Frequency matrix

A [ 1587 575 8 6247 70 472 31 11 4597 111 ]
C [ 1140 2177 6458 48 4309 171 30 4 519 4625 ]
G [ 3319 1025 3 98 340 5809 35 6449 1155 578 ]
T [ 428 2697 5 81 1755 22 6378 10 203 1159 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001236.1 USF2 ENCSR513UQG IMR-90 Homo sapiens
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