This page shows detailed deep learning-derived predictions and motifs for CTCF in cardiac muscle cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000228.1 |
| Cell line/tissue: | cardiac muscle cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DTI |
| Model: | BPNet |
| A [ | -1.86e-03 | -1.37e-03 | 2.79e-02 | -1.92e-03 | -4.94e-03 | 8.66e-02 | -5.35e-04 | 1.49e-02 | -6.28e-03 | -1.33e-03 | -2.46e-03 | -4.06e-03 | 6.83e-03 | -3.13e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.03e-01 | 1.91e-01 | 1.62e-04 | 6.24e-02 | 1.85e-02 | -3.08e-04 | -8.99e-05 | -2.71e-04 | -3.23e-04 | -8.93e-05 | 1.34e-03 | 8.95e-02 | 4.62e-05 | 3.29e-02 | ] |
| G [ | -2.27e-03 | -7.06e-04 | 8.28e-03 | 1.47e-02 | -2.73e-03 | 1.24e-03 | 1.97e-01 | 9.20e-02 | 6.57e-02 | 1.82e-01 | 1.18e-01 | 1.76e-04 | 6.07e-02 | 1.04e-02 | ] |
| T [ | -3.36e-03 | -9.10e-04 | -6.62e-03 | -2.62e-03 | 2.15e-02 | -2.43e-03 | -3.97e-04 | -8.25e-04 | 3.04e-03 | -9.20e-04 | -7.71e-04 | -3.73e-03 | -4.00e-03 | -8.18e-04 | ] |
| A [ | 5195 | 562 | 34878 | 3657 | 8536 | 44123 | 479 | 19352 | 4394 | 757 | 1964 | 9578 | 19791 | 6002 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 41958 | 53463 | 3043 | 29388 | 21668 | 1720 | 99 | 571 | 2273 | 243 | 3404 | 36876 | 4118 | 26185 | ] |
| G [ | 3720 | 213 | 7783 | 19464 | 4889 | 4948 | 53553 | 33710 | 31297 | 52843 | 44714 | 2760 | 26924 | 15796 | ] |
| T [ | 3537 | 172 | 8706 | 1902 | 19317 | 3619 | 279 | 777 | 16446 | 567 | 4327 | 5197 | 3576 | 6427 | ] |
