Detailed information of deep learning profile BP000234.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM18951 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000234.1
Cell line/tissue: GM18951
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EBD
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.85e-04 -5.80e-06 -4.05e-06 1.10e-02 1.69e-02 4.34e-03 -1.71e-04 -2.95e-04 -1.15e-04 -3.68e-04 -2.81e-03 ]
C [ 6.00e-05 7.81e-06 -3.73e-06 -5.10e-04 6.53e-04 -3.99e-04 -1.35e-04 8.17e-03 6.89e-02 6.42e-02 1.43e-02 ]
G [ 6.29e-02 9.27e-02 7.08e-02 2.61e-02 3.31e-04 -1.99e-04 -1.13e-04 -4.72e-04 -2.74e-09 5.30e-05 1.11e-03 ]
T [ -3.79e-04 -5.41e-06 1.67e-03 -7.94e-04 7.05e-06 3.89e-02 5.90e-02 3.33e-02 1.54e-05 -6.13e-04 -4.14e-03 ]

Frequency matrix

A [ 722 25 251 6118 7745 3099 592 922 384 734 5345 ]
C [ 717 39 82 1001 4991 1240 1128 5602 17733 16702 7556 ]
G [ 15792 18499 16244 9929 2983 1076 1234 895 75 252 2583 ]
T [ 1512 180 2166 1695 3024 13328 15788 11323 551 1055 3258 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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