Detailed information of deep learning profile BP000234.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM18951 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000234.1
Cell line/tissue: GM18951
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EBD
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.14e-03 -6.13e-04 1.54e-05 3.33e-02 5.90e-02 3.89e-02 7.05e-06 -7.94e-04 1.67e-03 -5.41e-06 -3.79e-04 ]
C [ 1.11e-03 5.30e-05 -2.74e-09 -4.72e-04 -1.13e-04 -1.99e-04 3.31e-04 2.61e-02 7.08e-02 9.27e-02 6.29e-02 ]
G [ 1.43e-02 6.42e-02 6.89e-02 8.17e-03 -1.35e-04 -3.99e-04 6.53e-04 -5.10e-04 -3.73e-06 7.81e-06 6.00e-05 ]
T [ -2.81e-03 -3.68e-04 -1.15e-04 -2.95e-04 -1.71e-04 4.34e-03 1.69e-02 1.10e-02 -4.05e-06 -5.80e-06 -2.85e-04 ]

Frequency matrix

A [ 3258 1055 551 11323 15788 13328 3024 1695 2166 180 1512 ]
C [ 2583 252 75 895 1234 1076 2983 9929 16244 18499 15792 ]
G [ 7556 16702 17733 5602 1128 1240 4991 1001 82 39 717 ]
T [ 5345 734 384 922 592 3099 7745 6118 251 25 722 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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