This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000235.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DYD |
| Model: | BPNet |
| A [ | -1.18e-03 | -8.21e-04 | 1.86e-02 | -1.35e-03 | -3.97e-03 | 5.86e-02 | -3.37e-04 | 1.07e-02 | -3.66e-03 | -8.37e-04 | -1.41e-03 | -2.37e-03 | 6.66e-03 | -2.19e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.13e-02 | 1.38e-01 | -6.61e-05 | 4.63e-02 | 1.18e-02 | -1.98e-04 | -7.32e-05 | -1.56e-04 | -2.12e-04 | -4.67e-05 | 1.12e-03 | 6.35e-02 | 2.09e-04 | 2.40e-02 | ] |
| G [ | -1.41e-03 | -3.27e-04 | 4.77e-03 | 9.23e-03 | -1.58e-03 | 7.87e-04 | 1.43e-01 | 5.94e-02 | 4.38e-02 | 1.26e-01 | 7.99e-02 | -4.48e-05 | 4.06e-02 | 6.92e-03 | ] |
| T [ | -2.14e-03 | -5.84e-04 | -4.16e-03 | -1.62e-03 | 1.66e-02 | -1.58e-03 | -2.87e-04 | -5.23e-04 | 3.76e-03 | -5.82e-04 | -5.48e-04 | -2.20e-03 | -2.78e-03 | -4.23e-04 | ] |
| A [ | 5161 | 622 | 36871 | 3537 | 8965 | 45337 | 515 | 19644 | 4461 | 1101 | 2384 | 9639 | 20935 | 6454 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 44062 | 55375 | 3014 | 31320 | 22190 | 1659 | 124 | 564 | 2297 | 567 | 3868 | 37868 | 4629 | 27010 | ] |
| G [ | 3557 | 118 | 7432 | 19506 | 4940 | 5406 | 55292 | 35250 | 31183 | 53549 | 45038 | 3136 | 26910 | 15964 | ] |
| T [ | 3485 | 151 | 8950 | 1903 | 20171 | 3864 | 335 | 808 | 18325 | 1049 | 4977 | 5623 | 3791 | 6838 | ] |
