This page shows detailed deep learning-derived predictions and motifs for CTCF in heart left ventricle using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000236.1 |
| Cell line/tissue: | heart left ventricle |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR544APK |
| Model: | BPNet |
| A [ | -1.17e-03 | -3.24e-03 | -2.62e-03 | -1.20e-04 | -4.92e-04 | 5.94e-03 | -5.47e-04 | -2.28e-04 | -2.26e-03 | 1.87e-02 | -1.94e-03 | -5.04e-03 | -3.95e-04 | -2.54e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.20e-02 | 4.92e-02 | -5.77e-04 | 9.68e-02 | 1.49e-01 | 4.75e-02 | 6.17e-02 | 1.67e-01 | 4.75e-04 | -1.95e-03 | 1.19e-02 | 5.93e-03 | -2.40e-04 | -1.79e-03 | ] |
| G [ | 2.86e-02 | -4.01e-04 | 7.99e-02 | 1.22e-04 | -2.98e-05 | 2.13e-04 | 8.09e-05 | -1.28e-05 | -2.62e-05 | 1.59e-02 | 5.99e-02 | -7.67e-04 | 1.61e-01 | 8.39e-02 | ] |
| T [ | -2.93e-03 | 9.09e-03 | -2.99e-03 | -1.30e-03 | -7.81e-04 | -3.54e-03 | 1.53e-02 | -3.84e-04 | 6.87e-02 | -5.31e-03 | -1.86e-03 | 2.55e-02 | -4.46e-04 | -1.58e-03 | ] |
| A [ | 3605 | 1934 | 2989 | 2961 | 227 | 12557 | 400 | 4 | 1907 | 12994 | 1014 | 5001 | 1 | 2410 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11603 | 17561 | 1087 | 30789 | 35616 | 20460 | 20610 | 36238 | 2313 | 2883 | 12514 | 4837 | 1 | 2428 | ] |
| G [ | 17321 | 1896 | 27077 | 1504 | 58 | 1264 | 281 | 1 | 927 | 14879 | 20726 | 1524 | 36248 | 27866 | ] |
| T [ | 3724 | 14861 | 5101 | 999 | 352 | 1971 | 14962 | 10 | 31107 | 5497 | 1999 | 24891 | 3 | 3550 | ] |
