Detailed information of deep learning profile BP000237.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: BHLHE40
Model ID: BP000237.1
Cell line/tissue: GM12878
Class: Basic helix-loop-helix factors (bHLH)
Family: Hairy-related factors
Best Match(es): MA0464.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O14503  
Source: ENCSR000DZJ
Model: BPNet

Contribution weight matrix (CWM)

A [ -9.01e-04 1.49e-03 1.09e-03 3.50e-02 0.00e+00 5.11e-06 -2.58e-05 1.18e-06 9.46e-03 -2.21e-03 ]
C [ 4.34e-03 -4.59e-03 6.99e-02 -2.69e-03 1.00e-01 -5.61e-06 5.09e-05 8.13e-06 2.05e-02 6.12e-03 ]
G [ 7.27e-03 4.96e-03 3.56e-06 2.00e-03 6.58e-07 1.00e-01 -2.69e-05 8.98e-02 -4.34e-04 4.37e-03 ]
T [ -1.85e-03 9.96e-03 -5.53e-05 -1.62e-03 8.78e-06 5.73e-06 5.70e-02 -9.33e-06 -9.72e-05 -1.54e-03 ]

Frequency matrix

A [ 11862 13721 8752 28743 0 44 3340 238 17263 9472 ]
C [ 17924 12499 42473 9366 61374 25 7624 431 26539 20997 ]
G [ 21596 19078 6351 16515 0 61295 5905 59689 9044 19258 ]
T [ 9996 16081 3803 6755 5 15 44510 1021 8534 11652 ]

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000380.1 BHLHE40 ENCSR000BID HepG2 Homo sapiens
BP000394.1 BHLHE40 ENCSR987MTA GM12878 Homo sapiens
BP000553.1 BHLHE40 ENCSR000EDT HepG2 Homo sapiens
BP000609.1 BHLHE40 ENCSR000EGV K562 Homo sapiens
BP000688.1 BHLHE40 ENCSR000DYJ A549 Homo sapiens
BP000730.1 BHLHE40 ENCSR957KYB IMR-90 Homo sapiens
Showing 6 profiles of page 1 from 1 pages
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