This page shows detailed deep learning-derived predictions and motifs for CTCF in GM13977 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000238.1 |
| Cell line/tissue: | GM13977 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DLB |
| Model: | BPNet |
| A [ | -1.95e-03 | -1.37e-03 | 2.27e-02 | -1.30e-03 | -4.66e-03 | 6.82e-02 | -4.38e-04 | 1.49e-02 | -5.10e-03 | -8.48e-04 | -1.87e-03 | -4.54e-03 | 8.69e-03 | -3.22e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.97e-02 | 1.63e-01 | 2.29e-05 | 5.03e-02 | 1.29e-02 | -3.94e-04 | -1.46e-04 | -2.20e-04 | -4.60e-04 | -1.11e-04 | 5.13e-04 | 9.26e-02 | -7.90e-05 | 3.56e-02 | ] |
| G [ | -2.13e-03 | -6.06e-04 | 6.89e-03 | 1.16e-02 | -2.11e-03 | 1.04e-03 | 1.76e-01 | 7.90e-02 | 5.56e-02 | 1.67e-01 | 1.09e-01 | -3.81e-04 | 5.84e-02 | 9.33e-03 | ] |
| T [ | -2.73e-03 | -9.51e-04 | -5.99e-03 | -2.23e-03 | 1.94e-02 | -2.36e-03 | -4.29e-04 | -6.08e-04 | 6.74e-03 | -6.60e-04 | -2.57e-04 | -3.52e-03 | -3.67e-03 | -6.22e-04 | ] |
| A [ | 5245 | 1535 | 34312 | 3751 | 8579 | 43143 | 514 | 19672 | 3641 | 721 | 1783 | 8217 | 19802 | 5467 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 42121 | 52069 | 3157 | 29905 | 21127 | 2006 | 128 | 489 | 2296 | 271 | 2835 | 39016 | 3571 | 27814 | ] |
| G [ | 3792 | 639 | 8738 | 19322 | 5435 | 5440 | 53764 | 33917 | 30490 | 53134 | 45470 | 2465 | 28461 | 15483 | ] |
| T [ | 3575 | 488 | 8525 | 1754 | 19590 | 4143 | 326 | 654 | 18305 | 606 | 4645 | 5034 | 2898 | 5968 | ] |