Detailed information of deep learning profile BP000244.1

This page shows detailed deep learning-derived predictions and motifs for PKNOX1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: PKNOX1
Model ID: BP000244.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Best Match(es): MA0782.2 MA0782.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55347  
Source: ENCSR115SMW
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.19e-05 1.08e-05 2.52e-02 0.00e+00 1.91e-02 -1.57e-04 1.52e-03 -4.83e-04 ]
C [ 3.63e-05 0.00e+00 4.95e-07 4.30e-02 9.28e-07 2.10e-04 2.82e-03 3.25e-03 ]
G [ -9.80e-06 4.74e-02 3.88e-05 2.23e-06 2.17e-04 1.46e-02 2.19e-03 1.04e-04 ]
T [ 2.39e-02 5.16e-06 1.29e-04 4.08e-04 4.44e-04 8.51e-05 -1.41e-04 4.26e-03 ]

Frequency matrix

A [ 17572 25 137545 27 120386 22102 41681 35448 ]
C [ 6311 5 2809 157858 3380 22412 41293 35429 ]
G [ 4684 158649 6650 25 13034 83217 42688 37134 ]
T [ 130118 6 11682 775 21885 30954 33023 50674 ]

3 profiles found for the same TF (PKNOX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000351.1 PKNOX1 ENCSR711XNY GM12878 Homo sapiens
BP000358.1 PKNOX1 ENCSR233FAG HEK293T Homo sapiens
BP001149.1 PKNOX1 ENCSR986XYK MCF-7 Homo sapiens
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