Detailed information of deep learning profile BP000244.1

This page shows detailed deep learning-derived predictions and motifs for PKNOX1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: PKNOX1
Model ID: BP000244.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Best Match(es): MA0782.2 MA0782.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55347  
Source: ENCSR115SMW
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.26e-03 -1.41e-04 8.51e-05 4.44e-04 4.08e-04 1.29e-04 5.16e-06 2.39e-02 ]
C [ 1.04e-04 2.19e-03 1.46e-02 2.17e-04 2.23e-06 3.88e-05 4.74e-02 -9.80e-06 ]
G [ 3.25e-03 2.82e-03 2.10e-04 9.28e-07 4.30e-02 4.95e-07 0.00e+00 3.63e-05 ]
T [ -4.83e-04 1.52e-03 -1.57e-04 1.91e-02 0.00e+00 2.52e-02 1.08e-05 -2.19e-05 ]

Frequency matrix

A [ 50674 33023 30954 21885 775 11682 6 130118 ]
C [ 37134 42688 83217 13034 25 6650 158649 4684 ]
G [ 35429 41293 22412 3380 157858 2809 5 6311 ]
T [ 35448 41681 22102 120386 27 137545 25 17572 ]

3 profiles found for the same TF (PKNOX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000351.1 PKNOX1 ENCSR711XNY GM12878 Homo sapiens
BP000358.1 PKNOX1 ENCSR233FAG HEK293T Homo sapiens
BP001149.1 PKNOX1 ENCSR986XYK MCF-7 Homo sapiens
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