This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000248.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR336VBV |
| Model: | BPNet |
| A [ | -9.66e-04 | -2.91e-03 | -2.62e-03 | -7.61e-05 | -4.07e-04 | 7.69e-03 | -5.34e-04 | -2.10e-04 | -1.59e-03 | 1.63e-02 | -1.71e-03 | -4.50e-03 | -7.42e-04 | -2.23e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.52e-03 | 4.92e-02 | -4.49e-04 | 9.47e-02 | 1.37e-01 | 4.59e-02 | 5.83e-02 | 1.39e-01 | 4.23e-04 | -1.67e-03 | 9.71e-03 | 4.34e-03 | -4.00e-04 | -1.56e-03 | ] |
| G [ | 2.90e-02 | -2.64e-04 | 8.05e-02 | 5.24e-04 | -2.38e-05 | -2.54e-04 | -9.63e-05 | -4.58e-05 | -2.02e-04 | 1.16e-02 | 4.44e-02 | -7.07e-05 | 1.36e-01 | 6.77e-02 | ] |
| T [ | -2.32e-03 | 7.99e-03 | -3.40e-03 | -1.27e-03 | -6.46e-04 | -3.97e-03 | 1.43e-02 | -3.74e-04 | 5.91e-02 | -3.68e-03 | -1.44e-03 | 2.14e-02 | -9.77e-04 | -1.41e-03 | ] |
| A [ | 5088 | 2584 | 4048 | 3986 | 405 | 17509 | 545 | 221 | 3293 | 18213 | 1735 | 7210 | 548 | 3523 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14448 | 24692 | 1490 | 42631 | 48592 | 27508 | 29495 | 49010 | 4268 | 4416 | 17339 | 7337 | 626 | 3681 | ] |
| G [ | 25396 | 2525 | 37049 | 1879 | 125 | 1690 | 374 | 111 | 1470 | 19136 | 27145 | 2856 | 47191 | 37439 | ] |
| T [ | 4833 | 19965 | 7179 | 1270 | 644 | 3059 | 19352 | 424 | 40734 | 8001 | 3548 | 32362 | 1401 | 5123 | ] |