Detailed information of deep learning profile BP000249.1

This page shows detailed deep learning-derived predictions and motifs for SCRT1 in HEK293 using a single trained BPNet model.

Model details

Name: SCRT1
Model ID: BP000249.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0743.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9BWW7  
Source: ENCSR605MGM
Model: BPNet

Contribution weight matrix (CWM)

A [ -9.33e-04 -2.51e-04 1.92e-02 6.06e-02 4.99e-07 5.01e-02 1.66e-03 -2.85e-04 -2.55e-04 -9.42e-04 ]
C [ -2.80e-04 4.38e-02 -1.31e-03 -1.42e-05 8.68e-02 1.19e-06 -7.54e-05 -6.64e-05 1.21e-04 -7.93e-04 ]
G [ 1.01e-02 -3.36e-04 -1.30e-04 1.84e-05 0.00e+00 -4.26e-06 2.97e-02 5.71e-02 -1.25e-04 1.28e-02 ]
T [ 4.09e-03 3.40e-04 -5.73e-04 -1.43e-04 -2.93e-07 -6.70e-05 -1.85e-04 -1.17e-04 5.23e-02 2.91e-04 ]

Frequency matrix

A [ 5652 3154 23376 35021 0 36536 6399 879 1077 5234 ]
C [ 5825 28000 6900 35 37280 175 374 759 3072 3828 ]
G [ 14899 1661 1998 1626 0 36 29638 34217 1042 20736 ]
T [ 10904 4465 5006 598 0 533 869 1425 32090 7482 ]