Detailed information of deep learning profile BP000249.1

This page shows detailed deep learning-derived predictions and motifs for SCRT1 in HEK293 using a single trained BPNet model.

Model details

Name: SCRT1
Model ID: BP000249.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0743.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9BWW7  
Source: ENCSR605MGM
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.91e-04 5.23e-02 -1.17e-04 -1.85e-04 -6.70e-05 -2.93e-07 -1.43e-04 -5.73e-04 3.40e-04 4.09e-03 ]
C [ 1.28e-02 -1.25e-04 5.71e-02 2.97e-02 -4.26e-06 0.00e+00 1.84e-05 -1.30e-04 -3.36e-04 1.01e-02 ]
G [ -7.93e-04 1.21e-04 -6.64e-05 -7.54e-05 1.19e-06 8.68e-02 -1.42e-05 -1.31e-03 4.38e-02 -2.80e-04 ]
T [ -9.42e-04 -2.55e-04 -2.85e-04 1.66e-03 5.01e-02 4.99e-07 6.06e-02 1.92e-02 -2.51e-04 -9.33e-04 ]

Frequency matrix

A [ 7482 32090 1425 869 533 0 598 5006 4465 10904 ]
C [ 20736 1042 34217 29638 36 0 1626 1998 1661 14899 ]
G [ 3828 3072 759 374 175 37280 35 6900 28000 5825 ]
T [ 5234 1077 879 6399 36536 0 35021 23376 3154 5652 ]