This page shows detailed deep learning-derived predictions and motifs for CTCF in hepatocyte using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000250.1 |
| Cell line/tissue: | hepatocyte |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 MA1929.1 MA1930.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR252QYR |
| Model: | BPNet |
| A [ | -1.07e-03 | -7.87e-04 | 1.66e-02 | -1.26e-03 | -3.20e-03 | 5.20e-02 | -3.02e-04 | 1.25e-02 | -3.70e-03 | -6.65e-04 | -1.22e-03 | -2.55e-03 | 6.90e-03 | -1.96e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.80e-02 | 1.17e-01 | -1.38e-04 | 3.74e-02 | 1.13e-02 | -2.84e-04 | -8.49e-05 | -1.88e-04 | -4.06e-04 | -1.19e-04 | 7.29e-04 | 6.15e-02 | -9.09e-05 | 2.52e-02 | ] |
| G [ | -1.55e-03 | -3.70e-04 | 4.56e-03 | 7.75e-03 | -1.88e-03 | 6.74e-04 | 1.22e-01 | 5.37e-02 | 4.04e-02 | 1.15e-01 | 7.52e-02 | -2.68e-04 | 4.11e-02 | 6.58e-03 | ] |
| T [ | -2.00e-03 | -4.19e-04 | -3.75e-03 | -1.53e-03 | 1.31e-02 | -1.69e-03 | -2.69e-04 | -4.85e-04 | 4.46e-03 | -4.41e-04 | -3.02e-04 | -2.17e-03 | -2.64e-03 | -7.93e-04 | ] |
| A [ | 4837 | 143 | 33973 | 2903 | 8070 | 41486 | 336 | 19421 | 3461 | 831 | 1552 | 8353 | 19584 | 5360 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 39239 | 50366 | 1972 | 27862 | 19916 | 1572 | 90 | 401 | 1903 | 283 | 2370 | 35264 | 3153 | 24835 | ] |
| G [ | 3190 | 12 | 6772 | 18114 | 4464 | 4260 | 49911 | 30181 | 27739 | 48824 | 42164 | 2147 | 24779 | 14792 | ] |
| T [ | 3273 | 18 | 7821 | 1660 | 18090 | 3221 | 202 | 536 | 17436 | 601 | 4453 | 4775 | 3023 | 5552 | ] |
