Detailed information of deep learning profile BP000257.1

This page shows detailed deep learning-derived predictions and motifs for FOXA3 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA3
Model ID: BP000257.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA1683.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55318  
Source: ENCSR788DXU
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.34e-04 7.77e-03 4.03e-03 4.20e-04 -1.23e-06 3.08e-02 3.58e-02 5.21e-02 -8.96e-06 4.58e-02 ]
C [ -1.42e-04 -8.04e-04 -6.81e-05 5.41e-06 1.08e-04 5.76e-03 8.23e-04 -6.25e-07 3.64e-02 -1.63e-05 ]
G [ -1.66e-04 7.35e-03 -1.35e-03 4.10e-02 -1.97e-06 4.92e-06 7.79e-06 4.22e-06 -4.98e-06 -3.07e-06 ]
T [ 1.74e-02 -5.10e-04 1.06e-02 1.35e-05 5.78e-02 1.37e-05 -1.53e-05 2.00e-05 5.64e-03 -4.61e-05 ]

Frequency matrix

A [ 2169 2787 2464 484 9 4583 6212 6897 32 6701 ]
C [ 932 1165 187 48 48 2083 468 9 5375 59 ]
G [ 781 2007 1237 6398 4 181 112 34 46 57 ]
T [ 3113 1036 3106 65 6934 148 203 55 1542 178 ]

Alternative motif patterns (AMPs)

2 profiles found for the same TF (FOXA3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000590.1 FOXA3 ENCSR231ZVN K562 Homo sapiens
BP001197.1 FOXA3 ENCSR092OVN HepG2 Homo sapiens
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