This page shows detailed deep learning-derived predictions and motifs for CTCF in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000259.1 |
| Cell line/tissue: | HeLa-S3 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AOA |
| Model: | BPNet |
| A [ | -2.17e-03 | -8.43e-04 | 2.43e-02 | -1.79e-03 | -4.83e-03 | 6.74e-02 | -4.40e-04 | 1.00e-02 | -5.05e-03 | -1.03e-03 | -1.87e-03 | -3.49e-03 | 4.49e-03 | -3.46e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.50e-02 | 1.74e-01 | 5.93e-04 | 5.74e-02 | 1.35e-02 | -2.66e-04 | -9.34e-05 | -8.89e-05 | -2.78e-04 | 7.42e-05 | 2.25e-03 | 7.70e-02 | 1.54e-03 | 3.20e-02 | ] |
| G [ | -1.30e-03 | -3.41e-04 | 4.24e-03 | 1.25e-02 | -1.71e-03 | 1.96e-03 | 1.75e-01 | 7.49e-02 | 5.59e-02 | 1.59e-01 | 9.76e-02 | 7.90e-04 | 4.99e-02 | 9.55e-03 | ] |
| T [ | -2.64e-03 | -6.49e-04 | -5.91e-03 | -2.13e-03 | 1.83e-02 | -2.23e-03 | -3.71e-04 | -7.38e-04 | 2.51e-03 | -9.02e-04 | -1.02e-03 | -3.13e-03 | -3.62e-03 | -1.08e-03 | ] |
| A [ | 4564 | 87 | 35066 | 3320 | 8037 | 41265 | 486 | 18071 | 4429 | 996 | 2128 | 8640 | 19664 | 5781 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 40254 | 50920 | 2541 | 27855 | 19986 | 1296 | 80 | 469 | 1677 | 534 | 2955 | 34434 | 3991 | 24419 | ] |
| G [ | 3014 | 5 | 4819 | 18026 | 4274 | 4778 | 50124 | 31805 | 27710 | 48584 | 41423 | 2599 | 23814 | 14888 | ] |
| T [ | 3203 | 24 | 8611 | 1836 | 18740 | 3697 | 346 | 691 | 17219 | 923 | 4530 | 5363 | 3567 | 5949 | ] |
