Detailed information of deep learning profile BP000260.1

This page shows detailed deep learning-derived predictions and motifs for NR2C2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2C2
Model ID: BP000260.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA0504.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49116  
Source: ENCSR000EVS
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.00e-04 -1.62e-04 4.23e-02 1.30e-03 -7.89e-05 -1.50e-04 -3.56e-04 -2.35e-05 -4.35e-04 4.76e-02 7.11e-04 -6.70e-04 -5.33e-04 ]
C [ 3.13e-03 -7.73e-04 5.31e-04 3.82e-02 5.12e-02 -8.30e-06 6.28e-03 1.22e-03 -8.70e-04 1.23e-03 4.04e-02 3.88e-02 9.34e-03 ]
G [ -2.45e-04 3.65e-02 -4.39e-04 -1.01e-04 6.33e-05 3.09e-04 -6.47e-04 1.99e-05 4.25e-02 -2.33e-04 -7.07e-05 3.16e-04 5.55e-04 ]
T [ 2.81e-02 -1.47e-04 -2.62e-04 -2.72e-04 -3.22e-04 2.79e-02 1.75e-02 4.72e-02 -1.41e-04 -3.78e-04 -4.48e-04 -7.68e-04 1.15e-02 ]

Frequency matrix

A [ 65 164 1266 255 13 42 74 4 127 1361 183 76 36 ]
C [ 300 153 305 1388 1677 385 771 107 136 255 1460 1523 782 ]
G [ 81 1310 140 66 17 37 79 30 1428 111 42 59 99 ]
T [ 1306 125 41 43 45 1288 828 1611 61 25 67 94 835 ]

Other motif patterns

4 profiles found for the same TF (NR2C2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000295.1 NR2C2 ENCSR559ZKI HepG2 Homo sapiens
BP000407.1 NR2C2 ENCSR454GVT WTC11 Homo sapiens
BP000895.1 NR2C2 ENCSR516SWI K562 Homo sapiens
BP001251.1 NR2C2 ENCSR750LYM K562 Homo sapiens
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