Detailed information of deep learning profile BP000262.1

This page shows detailed deep learning-derived predictions and motifs for MEF2A in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MEF2A
Model ID: BP000262.1
Cell line/tissue: K562
Class: MADS box factors
Family: Regulators of differentiation
Best Match(es): MA0052.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02078  
Source: ENCSR000BNV
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.57e-03 -4.10e-04 -2.15e-06 7.36e-02 1.43e-03 2.98e-03 9.85e-04 7.15e-03 -6.18e-04 4.08e-02 -5.94e-04 3.91e-03 ]
C [ -7.84e-04 4.46e-02 1.87e-04 -1.07e-05 -5.20e-05 -2.73e-05 -2.95e-04 -4.58e-04 -1.83e-04 1.18e-05 -5.52e-04 9.70e-03 ]
G [ 9.36e-03 -5.43e-04 3.49e-06 -9.62e-06 -6.13e-07 -1.25e-04 -5.50e-06 -3.05e-04 -7.09e-04 1.52e-02 3.75e-02 -1.19e-03 ]
T [ 4.44e-03 4.12e-04 7.97e-02 -3.44e-05 5.63e-02 3.73e-02 4.84e-02 2.13e-02 3.90e-02 4.56e-06 -3.23e-04 -2.14e-03 ]

Frequency matrix

A [ 829 333 3 6635 612 861 538 1659 860 4164 911 2409 ]
C [ 704 4850 86 16 22 114 371 703 279 35 370 2488 ]
G [ 2559 321 0 25 12 82 13 158 694 2564 4688 782 ]
T [ 2697 1285 6700 113 6143 5732 5867 4269 4956 26 820 1110 ]

2 profiles found for the same TF (MEF2A) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001090.1 MEF2A ENCSR000BVC SK-N-SH Homo sapiens
BP001102.1 MEF2A ENCSR000BKB GM12878 Homo sapiens
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