This page shows detailed deep learning-derived predictions and motifs for CTCF in transverse colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000264.1 |
| Cell line/tissue: | transverse colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR236YGF |
| Model: | BPNet |
| A [ | -6.65e-04 | -2.18e-03 | -2.44e-03 | -3.58e-04 | -3.65e-04 | 5.26e-03 | -3.52e-04 | -2.34e-04 | -1.68e-03 | 1.59e-02 | -1.34e-03 | -3.87e-03 | -4.39e-04 | -2.17e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.50e-03 | 4.27e-02 | 5.91e-05 | 8.23e-02 | 1.27e-01 | 4.27e-02 | 5.37e-02 | 1.40e-01 | 3.47e-04 | -1.57e-03 | 9.58e-03 | 5.77e-03 | -1.95e-04 | -1.47e-03 | ] |
| G [ | 2.29e-02 | 1.13e-05 | 6.73e-02 | 6.24e-04 | -7.46e-05 | -1.84e-04 | -6.34e-05 | -2.11e-05 | -1.56e-04 | 1.20e-02 | 5.13e-02 | -5.70e-04 | 1.39e-01 | 7.41e-02 | ] |
| T [ | -2.17e-03 | 6.82e-03 | -1.56e-03 | -1.14e-03 | -5.75e-04 | -2.70e-03 | 1.42e-02 | -3.08e-04 | 6.33e-02 | -4.21e-03 | -1.57e-03 | 2.26e-02 | -5.14e-04 | -1.24e-03 | ] |
| A [ | 3461 | 1816 | 2942 | 2796 | 411 | 11810 | 403 | 122 | 1744 | 12570 | 951 | 4478 | 145 | 2027 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10715 | 17490 | 1473 | 29370 | 33848 | 19603 | 21229 | 34571 | 2480 | 2867 | 11696 | 5384 | 142 | 2033 | ] |
| G [ | 17209 | 2091 | 25688 | 1689 | 234 | 1576 | 361 | 62 | 1178 | 14441 | 20436 | 1535 | 34216 | 27873 | ] |
| T [ | 3615 | 13603 | 4897 | 1145 | 507 | 2011 | 13007 | 245 | 29598 | 5123 | 1917 | 23603 | 497 | 3068 | ] |
