This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000268.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR216SIK |
| Model: | BPNet |
| A [ | -2.38e-03 | -1.91e-03 | -8.31e-04 | -1.04e-03 | 8.31e-04 | -6.43e-04 | -2.04e-04 | -1.71e-03 | 2.38e-02 | -1.66e-03 | -4.83e-03 | -5.80e-04 | -1.75e-03 | -3.79e-03 | -2.21e-03 | 1.06e-02 | 1.07e-03 | 3.72e-03 | 1.22e-03 | -8.65e-04 | -1.40e-03 | 4.66e-04 | -2.31e-04 | 3.30e-03 | 2.84e-02 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2.69e-02 | -1.70e-05 | 6.43e-02 | 1.21e-01 | 5.04e-02 | 8.69e-02 | 1.72e-01 | 1.59e-03 | -1.63e-03 | 1.06e-02 | 3.14e-03 | -2.38e-04 | -1.42e-03 | 1.44e-02 | 1.05e-02 | -2.00e-03 | 6.97e-05 | -9.05e-04 | 5.69e-06 | -1.20e-03 | -8.95e-04 | -1.37e-03 | -2.99e-03 | -1.81e-03 | -1.10e-03 | ] |
| G [ | 1.53e-03 | 4.50e-02 | 1.76e-03 | -5.03e-04 | -2.86e-04 | -1.02e-04 | -1.65e-05 | -3.93e-04 | 1.53e-02 | 6.35e-02 | -3.74e-04 | 1.74e-01 | 1.12e-01 | -2.66e-03 | 5.74e-03 | 1.39e-02 | 3.10e-03 | -1.32e-03 | -3.47e-04 | 3.11e-03 | 6.59e-03 | 1.24e-02 | 3.12e-02 | 1.38e-03 | -3.04e-03 | ] |
| T [ | 2.92e-03 | -6.09e-04 | -1.81e-03 | -1.66e-03 | -4.15e-03 | 5.35e-03 | -2.35e-04 | 8.05e-02 | -3.53e-03 | -9.97e-04 | 3.38e-02 | -5.32e-04 | -1.06e-03 | 7.39e-03 | -4.22e-03 | -4.31e-03 | -1.06e-03 | 1.02e-03 | 8.35e-04 | 1.26e-03 | -3.24e-04 | -2.26e-03 | -2.06e-03 | 2.68e-03 | -3.10e-04 | ] |
| A [ | 4664 | 5539 | 4771 | 2214 | 11637 | 651 | 1 | 1119 | 16535 | 816 | 5948 | 0 | 1120 | 7615 | 9107 | 17243 | 11269 | 13435 | 11493 | 9503 | 8980 | 10942 | 9928 | 12668 | 19529 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15220 | 3891 | 27691 | 35451 | 23588 | 27316 | 40195 | 1740 | 1622 | 12336 | 2809 | 0 | 836 | 15810 | 14024 | 4244 | 9266 | 7360 | 8117 | 8714 | 8224 | 5947 | 5025 | 8213 | 7944 | ] |
| G [ | 5554 | 22098 | 3829 | 1296 | 1420 | 133 | 0 | 315 | 16741 | 25143 | 1270 | 40192 | 35914 | 3945 | 8970 | 13641 | 10719 | 8508 | 9898 | 10951 | 12611 | 14416 | 18295 | 9489 | 5550 | ] |
| T [ | 14759 | 8669 | 3905 | 1235 | 3552 | 12098 | 1 | 37023 | 5299 | 1903 | 30170 | 5 | 2327 | 12827 | 8096 | 5069 | 8942 | 10893 | 10688 | 11029 | 10383 | 8891 | 6949 | 9827 | 7174 | ] |
