Detailed information of deep learning profile BP000270.1

This page shows detailed deep learning-derived predictions and motifs for PBX2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: PBX2
Model ID: BP000270.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Best Match(es): MA1113.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40425  
Source: ENCSR849DFF
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.95e-04 -4.20e-04 8.33e-04 -1.92e-05 -3.15e-05 4.63e-02 2.01e-02 -8.44e-05 -2.67e-04 3.82e-02 ]
C [ 2.16e-02 2.55e-03 -5.11e-05 2.96e-03 8.77e-02 -1.25e-03 -2.41e-03 1.80e-06 6.18e-02 -1.13e-03 ]
G [ -7.00e-04 -1.44e-05 7.35e-02 -3.10e-05 -1.37e-05 6.15e-05 1.21e-03 -1.88e-05 4.31e-05 4.47e-04 ]
T [ -4.39e-04 2.91e-02 -1.49e-04 5.86e-02 1.32e-05 -5.84e-04 -8.50e-04 8.30e-02 -3.31e-07 -1.61e-03 ]

Frequency matrix

A [ 1644 1265 781 295 47 7700 4005 195 445 6780 ]
C [ 5698 1700 65 2194 9856 1079 2676 212 8382 1049 ]
G [ 1498 606 8982 177 44 410 2375 165 533 744 ]
T [ 1237 6506 249 7411 130 889 1021 9505 717 1503 ]

2 profiles found for the same TF (PBX2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000665.1 PBX2 ENCSR263DFP K562 Homo sapiens
BP001057.1 PBX2 ENCSR633EIC K562 Homo sapiens
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