Detailed information of deep learning profile BP000270.1

This page shows detailed deep learning-derived predictions and motifs for PBX2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: PBX2
Model ID: BP000270.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Best Match(es): MA1113.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40425  
Source: ENCSR849DFF
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.61e-03 -3.31e-07 8.30e-02 -8.50e-04 -5.84e-04 1.32e-05 5.86e-02 -1.49e-04 2.91e-02 -4.39e-04 ]
C [ 4.47e-04 4.31e-05 -1.88e-05 1.21e-03 6.15e-05 -1.37e-05 -3.10e-05 7.35e-02 -1.44e-05 -7.00e-04 ]
G [ -1.13e-03 6.18e-02 1.80e-06 -2.41e-03 -1.25e-03 8.77e-02 2.96e-03 -5.11e-05 2.55e-03 2.16e-02 ]
T [ 3.82e-02 -2.67e-04 -8.44e-05 2.01e-02 4.63e-02 -3.15e-05 -1.92e-05 8.33e-04 -4.20e-04 -7.95e-04 ]

Frequency matrix

A [ 1503 717 9505 1021 889 130 7411 249 6506 1237 ]
C [ 744 533 165 2375 410 44 177 8982 606 1498 ]
G [ 1049 8382 212 2676 1079 9856 2194 65 1700 5698 ]
T [ 6780 445 195 4005 7700 47 295 781 1265 1644 ]

2 profiles found for the same TF (PBX2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000665.1 PBX2 ENCSR263DFP K562 Homo sapiens
BP001057.1 PBX2 ENCSR633EIC K562 Homo sapiens
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