This page shows detailed deep learning-derived predictions and motifs for CTCF in nephron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000271.1 |
| Cell line/tissue: | nephron |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR266ZUX |
| Model: | BPNet |
| A [ | -1.01e-03 | -3.05e-03 | -3.08e-03 | -5.57e-04 | -4.98e-04 | 5.50e-03 | -4.83e-04 | -2.69e-04 | -1.98e-03 | 1.85e-02 | -1.92e-03 | -4.60e-03 | -4.64e-04 | -2.74e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.01e-02 | 4.64e-02 | -6.16e-05 | 9.77e-02 | 1.54e-01 | 5.10e-02 | 6.44e-02 | 1.66e-01 | 3.77e-04 | -1.95e-03 | 1.16e-02 | 5.57e-03 | -2.94e-04 | -1.67e-03 | ] |
| G [ | 2.81e-02 | 3.86e-04 | 7.69e-02 | 1.22e-03 | -8.02e-05 | -1.40e-04 | -9.19e-05 | -4.49e-05 | -1.99e-04 | 1.66e-02 | 6.01e-02 | -1.97e-04 | 1.65e-01 | 8.63e-02 | ] |
| T [ | -2.65e-03 | 7.37e-03 | -1.86e-03 | -1.48e-03 | -7.63e-04 | -3.52e-03 | 1.62e-02 | -3.37e-04 | 7.53e-02 | -4.64e-03 | -1.66e-03 | 2.61e-02 | -6.51e-04 | -1.40e-03 | ] |
| A [ | 3529 | 2047 | 2773 | 2958 | 226 | 12911 | 369 | 41 | 1850 | 12605 | 1071 | 4673 | 1 | 2305 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11151 | 16165 | 961 | 30451 | 34512 | 19087 | 19824 | 35046 | 2277 | 2741 | 12464 | 4415 | 4 | 2157 | ] |
| G [ | 16821 | 2060 | 26530 | 1016 | 83 | 1209 | 284 | 13 | 891 | 14410 | 19757 | 1312 | 35181 | 27271 | ] |
| T [ | 3690 | 14919 | 4927 | 766 | 370 | 1984 | 14714 | 91 | 30173 | 5435 | 1899 | 24791 | 5 | 3458 | ] |
