This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000272.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR619WGF |
| Model: | BPNet |
| A [ | -1.51e-03 | -3.82e-03 | -3.55e-03 | -6.08e-04 | -7.66e-04 | 5.60e-03 | -5.48e-04 | -3.96e-04 | -2.93e-03 | 2.12e-02 | -2.45e-03 | -7.29e-03 | -5.04e-04 | -3.36e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.24e-02 | 5.61e-02 | -2.90e-04 | 1.12e-01 | 1.76e-01 | 5.79e-02 | 7.71e-02 | 1.93e-01 | 1.24e-03 | -2.27e-03 | 1.42e-02 | 7.26e-03 | -2.52e-04 | -1.91e-03 | ] |
| G [ | 3.07e-02 | -3.34e-04 | 9.19e-02 | 8.04e-04 | 7.21e-06 | 3.07e-04 | -1.90e-05 | -4.39e-05 | -1.46e-04 | 1.80e-02 | 6.77e-02 | -2.97e-04 | 1.91e-01 | 1.01e-01 | ] |
| T [ | -3.31e-03 | 8.14e-03 | -3.48e-03 | -1.71e-03 | -8.85e-04 | -4.83e-03 | 1.68e-02 | -4.37e-04 | 7.97e-02 | -6.43e-03 | -2.18e-03 | 2.49e-02 | -7.28e-04 | -2.04e-03 | ] |
| A [ | 5282 | 2902 | 4359 | 4014 | 614 | 15540 | 660 | 210 | 3048 | 17163 | 1469 | 6770 | 0 | 3008 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14631 | 22459 | 2241 | 38572 | 45180 | 26014 | 28436 | 46281 | 4013 | 4231 | 16373 | 6323 | 2 | 3174 | ] |
| G [ | 21872 | 3180 | 33062 | 2693 | 355 | 2335 | 593 | 67 | 1646 | 18285 | 26260 | 2313 | 46925 | 36486 | ] |
| T [ | 5147 | 18391 | 7269 | 1653 | 782 | 3043 | 17242 | 373 | 38224 | 7252 | 2829 | 31525 | 4 | 4263 | ] |
