Detailed information of deep learning profile BP000273.1

This page shows detailed deep learning-derived predictions and motifs for ARNT2 in HepG2 using a single trained BPNet model.

Model details

Name: ARNT2
Model ID: BP000273.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Best Match(es): MA1464.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9HBZ2  
Source: ENCSR267TGY
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.48e-04 -2.49e-04 -3.21e-04 -3.71e-04 -3.54e-04 -6.77e-04 -2.17e-04 -2.31e-04 -1.32e-05 4.94e-03 0.00e+00 0.00e+00 0.00e+00 -8.03e-07 ]
C [ 1.42e-03 1.90e-03 1.05e-03 2.21e-03 1.33e-03 1.09e-03 1.21e-05 2.23e-03 1.11e-02 -3.14e-06 1.46e-02 0.00e+00 7.09e-05 0.00e+00 ]
G [ 2.48e-03 9.38e-04 1.42e-03 1.08e-03 1.48e-03 2.47e-03 4.61e-03 7.01e-04 -5.44e-05 4.46e-05 0.00e+00 1.47e-02 0.00e+00 1.12e-02 ]
T [ -1.80e-04 -2.75e-04 -1.72e-04 -2.82e-04 -6.82e-04 -2.92e-04 -2.44e-04 -4.02e-04 0.00e+00 -1.16e-05 0.00e+00 0.00e+00 4.69e-03 5.61e-06 ]

Frequency matrix

A [ 330 385 334 435 453 493 530 206 6 2020 0 0 63 0 ]
C [ 699 788 687 696 668 389 305 912 2158 43 2166 0 26 2 ]
G [ 838 567 649 747 722 1039 1193 624 2 29 0 2167 62 2162 ]
T [ 300 427 497 289 324 246 139 425 1 75 1 0 2016 3 ]