This page shows detailed deep learning-derived predictions and motifs for CTCF in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000274.1 |
| Cell line/tissue: | T47D |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000BNO |
| Model: | BPNet |
| A [ | -9.97e-04 | -2.36e-03 | -2.06e-03 | -4.01e-04 | -2.73e-04 | 6.83e-03 | -2.84e-04 | -2.05e-04 | -1.42e-03 | 1.01e-02 | -1.22e-03 | -3.32e-03 | -4.22e-04 | -1.81e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.21e-03 | 4.07e-02 | -7.45e-04 | 7.26e-02 | 1.10e-01 | 3.06e-02 | 4.23e-02 | 1.15e-01 | 2.75e-04 | -1.44e-03 | 9.05e-03 | 4.50e-03 | -1.97e-04 | -9.44e-04 | ] |
| G [ | 2.48e-02 | -4.29e-04 | 6.79e-02 | -1.48e-04 | -3.65e-05 | -1.20e-04 | -3.48e-05 | -4.81e-05 | -2.73e-04 | 9.63e-03 | 3.86e-02 | -4.98e-04 | 1.15e-01 | 5.62e-02 | ] |
| T [ | -2.47e-03 | 4.04e-03 | -2.32e-03 | -9.38e-04 | -4.63e-04 | -1.81e-03 | 1.36e-02 | -2.97e-04 | 4.60e-02 | -3.27e-03 | -1.22e-03 | 1.79e-02 | -5.75e-04 | -1.66e-03 | ] |
| A [ | 2925 | 1632 | 2293 | 2041 | 28 | 12122 | 278 | 132 | 1944 | 10437 | 856 | 4015 | 1 | 1897 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9622 | 14120 | 644 | 26903 | 30213 | 15842 | 16821 | 29888 | 2395 | 2543 | 10508 | 3546 | 1 | 1851 | ] |
| G [ | 14777 | 1355 | 23268 | 755 | 6 | 924 | 236 | 57 | 908 | 12301 | 17467 | 1069 | 30288 | 23774 | ] |
| T [ | 2971 | 13188 | 4090 | 597 | 48 | 1408 | 12960 | 218 | 25048 | 5015 | 1464 | 21665 | 5 | 2772 | ] |
