This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000276.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR341OQG |
| Model: | BPNet |
| A [ | -2.58e-03 | -2.06e-03 | -4.26e-04 | 1.03e-03 | 7.87e-04 | 1.78e-04 | -1.58e-03 | -4.59e-03 | -4.90e-03 | 7.10e-03 | -1.48e-03 | -9.89e-04 | 2.99e-02 | -1.38e-03 | -4.32e-03 | 8.13e-02 | -3.68e-04 | 7.47e-03 | -4.69e-03 | -1.40e-03 | -2.06e-03 | -1.39e-03 | 4.75e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2.85e-02 | 1.29e-02 | 7.04e-03 | 3.28e-03 | 6.71e-04 | -2.04e-04 | 4.07e-03 | 1.48e-02 | 6.44e-03 | -2.99e-03 | 1.11e-01 | 1.83e-01 | 3.30e-04 | 6.26e-02 | 1.61e-02 | -3.36e-04 | -6.03e-05 | -2.28e-04 | -4.43e-04 | -2.17e-04 | 1.72e-03 | 5.97e-02 | 1.34e-03 | ] |
| G [ | -3.05e-03 | -1.76e-03 | -1.08e-03 | -9.64e-04 | -6.14e-04 | -1.00e-03 | 3.35e-04 | -2.33e-03 | 1.00e-02 | 1.59e-02 | -1.81e-03 | -4.31e-04 | 3.98e-03 | 1.25e-02 | -1.95e-03 | 1.41e-03 | 1.83e-01 | 9.19e-02 | 5.70e-02 | 1.45e-01 | 8.33e-02 | 2.36e-04 | 3.70e-02 | ] |
| T [ | -3.36e-04 | -6.48e-05 | -1.68e-03 | -1.22e-03 | 9.47e-04 | 3.57e-03 | 7.03e-04 | 8.90e-03 | -2.80e-03 | -4.39e-03 | -2.34e-03 | -7.47e-04 | -5.83e-03 | -1.94e-03 | 2.39e-02 | -2.11e-03 | -2.54e-04 | -7.37e-04 | 2.03e-03 | -1.17e-03 | -8.77e-04 | -2.96e-03 | -2.81e-03 | ] |
| A [ | 6546 | 7671 | 9295 | 9702 | 10008 | 9896 | 8399 | 4921 | 7685 | 10956 | 2930 | 5 | 27074 | 1741 | 5663 | 31444 | 23 | 13798 | 1994 | 27 | 1553 | 6745 | 14819 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15502 | 12649 | 11228 | 10161 | 9064 | 7667 | 9030 | 11476 | 7446 | 3518 | 30258 | 36150 | 1042 | 21928 | 13684 | 565 | 3 | 136 | 668 | 11 | 1909 | 23694 | 3319 | ] |
| G [ | 4944 | 5790 | 7318 | 7910 | 7339 | 6806 | 8602 | 4389 | 12483 | 14760 | 1275 | 0 | 2718 | 11582 | 2055 | 2284 | 36110 | 21805 | 21240 | 36092 | 29231 | 1849 | 14978 | ] |
| T [ | 9163 | 10045 | 8315 | 8382 | 9744 | 11785 | 10124 | 15369 | 8541 | 6921 | 1691 | 0 | 5321 | 903 | 14752 | 1862 | 19 | 416 | 12253 | 25 | 3462 | 3867 | 3038 | ] |
