Detailed information of deep learning profile BP000278.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000278.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR471EKW
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.84e-03 4.49e-05 6.14e-03 5.86e-02 6.56e-07 2.82e-02 -8.50e-04 2.02e-03 2.48e-03 -2.00e-03 -6.49e-05 -5.34e-04 9.89e-04 -1.88e-04 -1.97e-03 ]
C [ -1.23e-04 -4.58e-06 -1.27e-03 -4.61e-07 8.98e-02 -1.22e-04 1.40e-03 -4.66e-04 4.37e-03 2.56e-03 -1.37e-04 -5.80e-04 -4.28e-04 3.59e-02 5.81e-03 ]
G [ 5.40e-03 6.00e-02 -5.29e-04 -1.59e-06 -8.88e-07 1.97e-03 1.29e-03 -5.23e-04 1.49e-03 -1.52e-03 7.65e-02 -5.31e-04 -1.10e-03 -2.72e-04 -5.74e-06 ]
T [ -1.34e-03 1.46e-05 1.92e-03 -4.16e-05 1.93e-06 -5.77e-04 6.34e-03 2.93e-03 -1.22e-03 1.73e-02 -3.64e-06 4.44e-02 3.60e-03 -9.35e-04 5.19e-03 ]

Frequency matrix

A [ 29640 2773 26162 57796 1 47008 10662 18823 16389 15794 1431 9488 14370 12425 12801 ]
C [ 1534 95 8188 253 61465 1234 14819 12151 18325 4482 1706 6516 14618 31903 19089 ]
G [ 18909 56889 12578 673 5 3430 17227 12346 15744 5653 57879 5453 11601 3468 6224 ]
T [ 11398 1724 14552 2758 10 9808 18773 18162 11024 35552 465 40024 20891 13685 23366 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages