This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000283.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR343RJH |
| Model: | BPNet |
| A [ | -1.16e-03 | -5.97e-04 | 2.20e-02 | -1.32e-03 | -3.97e-03 | 6.62e-02 | -3.19e-04 | 1.68e-02 | -2.91e-03 | -5.87e-04 | -1.32e-03 | -2.33e-03 | 6.44e-03 | -2.49e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.11e-02 | 1.43e-01 | -4.96e-04 | 4.72e-02 | 1.50e-02 | -1.25e-04 | -5.07e-05 | -1.37e-05 | 1.03e-04 | -3.89e-05 | 6.82e-04 | 6.85e-02 | -2.58e-04 | 2.30e-02 | ] |
| G [ | -1.35e-03 | -2.17e-04 | 6.70e-03 | 1.04e-02 | -1.82e-03 | 4.61e-04 | 1.42e-01 | 6.00e-02 | 4.40e-02 | 1.33e-01 | 8.86e-02 | -1.84e-05 | 4.62e-02 | 9.06e-03 | ] |
| T [ | -2.15e-03 | -4.29e-04 | -4.85e-03 | -1.63e-03 | 1.38e-02 | -1.94e-03 | -2.14e-04 | -3.72e-04 | 4.48e-03 | -4.60e-04 | 8.35e-05 | -2.53e-03 | -2.41e-03 | -5.00e-04 | ] |
| A [ | 3344 | 44 | 23673 | 2025 | 5277 | 30744 | 2 | 12814 | 2043 | 221 | 860 | 5109 | 13592 | 3677 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 27601 | 35370 | 1631 | 19298 | 15088 | 946 | 0 | 214 | 1473 | 74 | 1511 | 25886 | 1975 | 17009 | ] |
| G [ | 2304 | 12 | 5256 | 13067 | 3024 | 2108 | 35437 | 22133 | 19882 | 34967 | 30424 | 1437 | 18394 | 11221 | ] |
| T [ | 2192 | 15 | 4880 | 1050 | 12052 | 1644 | 2 | 280 | 12043 | 179 | 2646 | 3009 | 1480 | 3534 | ] |
