This page shows detailed deep learning-derived predictions and motifs for CTCF in smooth muscle cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000285.1 |
| Cell line/tissue: | smooth muscle cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR261VAS |
| Model: | BPNet |
| A [ | -1.12e-03 | -3.62e-03 | -3.39e-03 | -4.66e-04 | -6.32e-04 | 5.05e-03 | -5.74e-04 | -2.55e-04 | -2.21e-03 | 2.12e-02 | -1.99e-03 | -5.02e-03 | -5.98e-04 | -2.62e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.88e-03 | 5.38e-02 | -6.22e-04 | 1.03e-01 | 1.64e-01 | 5.74e-02 | 7.96e-02 | 1.80e-01 | 4.02e-04 | -2.40e-03 | 1.22e-02 | 5.80e-03 | -3.47e-04 | -2.11e-03 | ] |
| G [ | 3.20e-02 | 3.21e-05 | 8.09e-02 | 5.19e-06 | -1.03e-04 | -5.25e-04 | -2.04e-04 | -4.49e-05 | -4.18e-04 | 1.61e-02 | 5.98e-02 | -4.37e-04 | 1.79e-01 | 9.31e-02 | ] |
| T [ | -2.95e-03 | 9.46e-03 | -2.60e-03 | -1.58e-03 | -1.03e-03 | -4.43e-03 | 1.81e-02 | -4.09e-04 | 8.73e-02 | -4.72e-03 | -1.84e-03 | 2.89e-02 | -8.53e-04 | -1.75e-03 | ] |
| A [ | 4144 | 2291 | 3647 | 3329 | 310 | 14434 | 330 | 39 | 2024 | 14834 | 1232 | 5742 | 13 | 2582 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12004 | 20217 | 1307 | 35597 | 40206 | 22750 | 24204 | 40963 | 2775 | 3124 | 14663 | 5133 | 12 | 2319 | ] |
| G [ | 20558 | 2221 | 29940 | 1166 | 90 | 1329 | 229 | 18 | 924 | 16880 | 22847 | 1555 | 40982 | 32325 | ] |
| T [ | 4370 | 16346 | 6182 | 984 | 470 | 2563 | 16313 | 56 | 35353 | 6238 | 2334 | 28646 | 69 | 3850 | ] |
