Detailed information of deep learning profile BP000287.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000287.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4 MA0148.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR000BMO
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.69e-04 1.40e-02 -9.40e-06 -6.73e-05 -1.50e-05 9.39e-02 4.25e-05 1.48e-02 -1.25e-03 1.75e-02 ]
C [ -4.28e-05 -4.87e-05 -1.52e-05 -4.55e-06 7.41e-07 2.40e-06 6.45e-02 -7.65e-04 7.36e-03 -8.66e-04 ]
G [ -9.22e-05 6.64e-02 5.37e-06 1.98e-03 9.23e-03 1.60e-05 -4.14e-05 -2.18e-04 -1.31e-03 -6.20e-04 ]
T [ 7.25e-02 4.01e-06 9.98e-02 6.97e-02 5.99e-02 -1.45e-05 1.52e-03 5.41e-03 1.32e-02 5.46e-03 ]

Frequency matrix

A [ 5269 22620 490 1525 1850 86508 5123 35694 13039 36563 ]
C [ 2111 1044 649 1268 1621 256 67908 17081 23748 7933 ]
G [ 2007 64087 285 11293 22393 908 1630 2695 14171 10796 ]
T [ 78950 587 86914 74252 62475 667 13677 32868 37380 33047 ]

Alternative motif patterns (AMPs)

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001104.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens
Showing 1 profiles of page 2 from 2 pages