Detailed information of deep learning profile BP000287.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000287.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4 MA0148.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR000BMO
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.46e-03 1.32e-02 5.41e-03 1.52e-03 -1.45e-05 5.99e-02 6.97e-02 9.98e-02 4.01e-06 7.25e-02 ]
C [ -6.20e-04 -1.31e-03 -2.18e-04 -4.14e-05 1.60e-05 9.23e-03 1.98e-03 5.37e-06 6.64e-02 -9.22e-05 ]
G [ -8.66e-04 7.36e-03 -7.65e-04 6.45e-02 2.40e-06 7.41e-07 -4.55e-06 -1.52e-05 -4.87e-05 -4.28e-05 ]
T [ 1.75e-02 -1.25e-03 1.48e-02 4.25e-05 9.39e-02 -1.50e-05 -6.73e-05 -9.40e-06 1.40e-02 -3.69e-04 ]

Frequency matrix

A [ 33047 37380 32868 13677 667 62475 74252 86914 587 78950 ]
C [ 10796 14171 2695 1630 908 22393 11293 285 64087 2007 ]
G [ 7933 23748 17081 67908 256 1621 1268 649 1044 2111 ]
T [ 36563 13039 35694 5123 86508 1850 1525 490 22620 5269 ]

Alternative motif patterns (AMPs)

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000233.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens
BP000429.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens
BP000465.1 FOXA1 ENCSR324RCI liver Homo sapiens
BP000621.1 FOXA1 ENCSR000BKY T47D Homo sapiens
BP000807.1 FOXA1 ENCSR000BRD A549 Homo sapiens
BP000816.1 FOXA1 ENCSR819LHG K562 Homo sapiens
BP000880.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens
BP000958.1 FOXA1 ENCSR735KEY liver Homo sapiens
BP001033.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens
BP001046.1 FOXA1 ENCSR000BPX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages