This page shows detailed deep learning-derived predictions and motifs for CTCF in SU-DHL-6 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000288.1 |
| Cell line/tissue: | SU-DHL-6 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR125DKL |
| Model: | BPNet |
| A [ | -1.72e-03 | -1.37e-03 | 1.92e-02 | -1.31e-03 | -4.51e-03 | 6.99e-02 | -3.21e-04 | 1.20e-02 | -4.81e-03 | -7.99e-04 | -1.87e-03 | -3.79e-03 | 6.90e-03 | -3.00e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.19e-02 | 1.56e-01 | 1.12e-03 | 5.05e-02 | 1.38e-02 | -3.20e-04 | -9.09e-05 | -2.05e-04 | -2.57e-04 | -6.20e-05 | 2.03e-03 | 8.97e-02 | 3.41e-04 | 3.60e-02 | ] |
| G [ | -1.61e-03 | -5.05e-04 | 6.00e-03 | 1.06e-02 | -1.77e-03 | 1.38e-03 | 1.71e-01 | 8.21e-02 | 5.79e-02 | 1.61e-01 | 1.10e-01 | 2.72e-04 | 5.91e-02 | 9.52e-03 | ] |
| T [ | -2.87e-03 | -1.11e-03 | -5.64e-03 | -2.18e-03 | 2.07e-02 | -2.34e-03 | -3.67e-04 | -6.65e-04 | 5.12e-03 | -6.32e-04 | -2.94e-04 | -3.20e-03 | -3.64e-03 | -7.32e-04 | ] |
| A [ | 6044 | 1199 | 38075 | 4498 | 9447 | 47941 | 611 | 20198 | 3851 | 672 | 1758 | 9178 | 22171 | 6116 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 45049 | 57395 | 3740 | 32039 | 22680 | 1792 | 144 | 431 | 2130 | 161 | 2892 | 42791 | 3740 | 30428 | ] |
| G [ | 4454 | 727 | 8087 | 20974 | 5681 | 5551 | 58730 | 38525 | 33443 | 58435 | 50299 | 2380 | 30254 | 16398 | ] |
| T [ | 4312 | 538 | 9957 | 2348 | 22051 | 4575 | 374 | 704 | 20434 | 591 | 4910 | 5510 | 3694 | 6917 | ] |
