Detailed information of deep learning profile BP000289.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000289.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR000BHG
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.87e-04 3.19e-03 5.20e-02 -2.33e-05 2.09e-02 -1.50e-03 3.19e-03 8.92e-03 -8.17e-04 8.54e-07 -6.20e-05 1.19e-03 -3.71e-05 -1.40e-03 ]
C [ -3.85e-04 -2.20e-03 -9.30e-04 8.69e-02 -2.12e-03 1.72e-03 -1.19e-03 -5.30e-04 2.72e-03 -5.65e-06 -8.37e-06 4.22e-05 7.20e-02 7.85e-03 ]
G [ 4.87e-02 3.74e-04 -2.23e-04 -3.35e-04 3.42e-03 4.65e-03 -9.77e-04 1.94e-03 -2.27e-04 1.06e-01 -3.36e-06 -1.87e-03 2.63e-06 -7.89e-05 ]
T [ -8.85e-04 4.48e-04 -9.40e-04 -6.99e-05 -3.40e-03 1.62e-03 1.49e-03 -1.02e-03 3.58e-02 0.00e+00 6.99e-02 7.01e-03 2.28e-05 7.82e-03 ]

Frequency matrix

A [ 3442 6825 14107 188 11885 3398 5755 6103 2472 3 641 4082 504 3118 ]
C [ 801 3713 1570 18305 1678 5357 4078 5225 1195 1 229 4511 18453 7268 ]
G [ 12731 5099 1702 782 1784 6297 4027 5085 363 19853 74 2717 39 423 ]
T [ 2882 4220 2478 582 4510 4804 5998 3444 15827 0 18913 8547 861 9048 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages