Detailed information of deep learning profile BP000289.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000289.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR000BHG
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.82e-03 2.28e-05 7.01e-03 6.99e-02 0.00e+00 3.58e-02 -1.02e-03 1.49e-03 1.62e-03 -3.40e-03 -6.99e-05 -9.40e-04 4.48e-04 -8.85e-04 ]
C [ -7.89e-05 2.63e-06 -1.87e-03 -3.36e-06 1.06e-01 -2.27e-04 1.94e-03 -9.77e-04 4.65e-03 3.42e-03 -3.35e-04 -2.23e-04 3.74e-04 4.87e-02 ]
G [ 7.85e-03 7.20e-02 4.22e-05 -8.37e-06 -5.65e-06 2.72e-03 -5.30e-04 -1.19e-03 1.72e-03 -2.12e-03 8.69e-02 -9.30e-04 -2.20e-03 -3.85e-04 ]
T [ -1.40e-03 -3.71e-05 1.19e-03 -6.20e-05 8.54e-07 -8.17e-04 8.92e-03 3.19e-03 -1.50e-03 2.09e-02 -2.33e-05 5.20e-02 3.19e-03 -7.87e-04 ]

Frequency matrix

A [ 9048 861 8547 18913 0 15827 3444 5998 4804 4510 582 2478 4220 2882 ]
C [ 423 39 2717 74 19853 363 5085 4027 6297 1784 782 1702 5099 12731 ]
G [ 7268 18453 4511 229 1 1195 5225 4078 5357 1678 18305 1570 3713 801 ]
T [ 3118 504 4082 641 3 2472 6103 5755 3398 11885 188 14107 6825 3442 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages