This page shows detailed deep learning-derived predictions and motifs for CTCF in Calu3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000290.1 |
| Cell line/tissue: | Calu3 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR921ERP |
| Model: | BPNet |
| A [ | -7.03e-04 | -2.44e-03 | -2.87e-03 | -2.91e-04 | -4.32e-04 | 5.14e-03 | -3.11e-04 | -2.06e-04 | -1.67e-03 | 1.84e-02 | -1.73e-03 | -4.56e-03 | -4.52e-04 | -2.29e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.44e-03 | 4.35e-02 | -1.83e-05 | 9.28e-02 | 1.49e-01 | 4.79e-02 | 6.53e-02 | 1.59e-01 | 2.52e-04 | -1.87e-03 | 1.11e-02 | 4.54e-03 | -2.50e-04 | -1.59e-03 | ] |
| G [ | 2.46e-02 | 8.01e-05 | 7.53e-02 | 9.66e-04 | -1.23e-04 | -3.11e-04 | -6.65e-05 | -3.85e-05 | -2.73e-04 | 1.37e-02 | 5.60e-02 | -2.47e-04 | 1.58e-01 | 8.58e-02 | ] |
| T [ | -2.36e-03 | 7.02e-03 | -2.53e-03 | -1.41e-03 | -7.09e-04 | -2.75e-03 | 1.48e-02 | -3.07e-04 | 7.12e-02 | -4.70e-03 | -1.39e-03 | 2.55e-02 | -7.84e-04 | -1.60e-03 | ] |
| A [ | 4028 | 2335 | 3370 | 2970 | 533 | 12028 | 394 | 157 | 2070 | 13232 | 1043 | 5155 | 269 | 2193 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11207 | 18397 | 2090 | 31102 | 36178 | 21958 | 24169 | 37164 | 2846 | 3032 | 12922 | 5707 | 279 | 2291 | ] |
| G [ | 18319 | 3058 | 26484 | 2214 | 379 | 1472 | 266 | 67 | 1103 | 16002 | 21499 | 1926 | 36401 | 29968 | ] |
| T [ | 4143 | 13906 | 5751 | 1410 | 606 | 2237 | 12867 | 308 | 31677 | 5429 | 2232 | 24908 | 747 | 3244 | ] |