This page shows detailed deep learning-derived predictions and motifs for CTCF in nephron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000292.1 |
| Cell line/tissue: | nephron |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR966OUM |
| Model: | BPNet |
| A [ | -1.29e-03 | -1.17e-03 | 2.27e-02 | -1.98e-03 | -4.17e-03 | 7.17e-02 | -3.48e-04 | 1.57e-02 | -4.73e-03 | -6.85e-04 | -1.44e-03 | -3.00e-03 | 7.90e-03 | -2.71e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.21e-02 | 1.59e-01 | -1.38e-04 | 4.98e-02 | 1.63e-02 | -2.58e-04 | -7.54e-05 | -1.74e-04 | -2.61e-04 | -5.05e-05 | -1.97e-04 | 7.97e-02 | -4.40e-04 | 3.03e-02 | ] |
| G [ | -1.85e-03 | -4.05e-04 | 6.27e-03 | 1.27e-02 | -1.87e-03 | 4.82e-04 | 1.61e-01 | 7.04e-02 | 4.91e-02 | 1.54e-01 | 1.03e-01 | -8.70e-04 | 5.00e-02 | 1.08e-02 | ] |
| T [ | -2.74e-03 | -6.78e-04 | -5.37e-03 | -1.91e-03 | 1.52e-02 | -2.18e-03 | -2.59e-04 | -5.67e-04 | 4.63e-03 | -4.11e-04 | -2.15e-04 | -3.04e-03 | -3.44e-03 | -1.26e-03 | ] |
| A [ | 4438 | 1176 | 27891 | 2910 | 6816 | 35657 | 415 | 16426 | 2948 | 203 | 710 | 6225 | 17103 | 4263 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 32285 | 40818 | 2192 | 22970 | 17336 | 1313 | 90 | 310 | 1754 | 29 | 896 | 32076 | 2122 | 21364 | ] |
| G [ | 3123 | 455 | 6727 | 15501 | 3769 | 3293 | 42117 | 25759 | 22915 | 42502 | 38027 | 1153 | 21381 | 13099 | ] |
| T [ | 3005 | 402 | 6042 | 1470 | 14930 | 2588 | 229 | 356 | 15235 | 117 | 3218 | 3397 | 2245 | 4125 | ] |
